SRR606249 spiked with fungal and viral Illumina reads at 1x, 10X, and 100X
SRR606249 spiked with fungal and viral Illumina reads at 1x, 10X, and 100X using the ART simulator. See also:https://osf.io/dm938/ andhttps://dahak-metagenomics.github.io/ Fungal and viral genomes used for computational spike-ins. Kingdom Organism Accession Link Fungus Candida albicans SC5314 NC_032089.1 https://www.ncbi.nlm.nih.gov/genome/?term=Candida+albicans Fungus Cryptococcus neoformans var. grubii H99 NC_026745.1 https://www.ncbi.nlm.nih.gov/genome/?term=Cryptococcus+neoformans Fungus Aspergillus fumigatus Af293 NC_007194.1 https://www.ncbi.nlm.nih.gov/genome/?term=Aspergillus+fumigatus Fungus Histoplasma capsulatum NAm1 NW_001813913.1 https://www.ncbi.nlm.nih.gov/genome/?term=Histoplasma+capsulatum Virus Human immunodeficiency virus 1 NC_001802.1 https://www.ncbi.nlm.nih.gov/genome/10319 Virus Influenza A virus (A/New York/392/2004(H3N2)) NC_007373.1 https://www.ncbi.nlm.nih.gov/genome/10290 Virus Marburg virus - Musoke, Kenya, 1980 NC_001608.3 https://www.ncbi.nlm.nih.gov/genome/5314 Virus Ebola virus - Mayinga, Zaire, 1976 NC_002549.1 https://www.ncbi.nlm.nih.gov/assembly/GCF_000848505.1/
This page was built for dataset: SRR606249 spiked with fungal and viral Illumina reads at 1x, 10X, and 100X
