GENCODE mouse & human transcript to gene files for txImport
From MaRDI portal
GENCODE data downloaded for human (GRCh38p12 v28)and mouse (GRCm38p6 vM18). For each organism (human=v28, mouse=vM18), there is an R script with the commands necessary to generate the tx2gene CSV that can be read in and used with the tximport Bioconductor package for summarizing transcript abundances to the gene level. gencode.v28 = human gencode.vM18 = mouse
This page was built for dataset: GENCODE mouse & human transcript to gene files for txImport
