Octopus bimaculoides genome assembly
DOI10.5281/zenodo.7140935Zenodo7140935MaRDI QIDQ6682963FDOQ6682963
Dataset published at Zenodo repository.
Jeremea O. Songco-Casey, Gabrielle Coffing, Cristopher Niell, Andrew Kern, Judit Pungor, Denise Piscopo, Adam Miller
Publication date: 29 June 2022
Copyright license: Creative Commons Attribution 4.0 International
To facilitate identification of molecular cell types in theOctopus bimaculoidesoptic lobe, we conducted high fidelity long-read genomic and transcriptomic sequencing. Here, we provide open access to these datafiles, which resulted in a single-cell atlas of theO. bimaculoidesvisual system (https://doi.org/10.1016/j.cub.2022.10.015). Below, we include a new genome assembly and annotation, phylogenetic trees for genes referenced in the manuscript, Cell Ranger outputs, and R scripts and files for Seurat cluster analysis. Raw single-cell sequence files are deposited to NCBI SRA at BioProject ID PRJNA854179. If any of these files are used, we ask that the paper is cited.
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