Structural Basis of the Function of Yariv Reagent - An Important Tool to Study Arabinogalactan Proteins

DOI10.5281/zenodo.4767970Zenodo4767970MaRDI QIDQ6684262FDOQ6684262

Dataset published at Zenodo repository.

Vojtech Spiwok, Anna Rodionova, Anna Pavlů, Anna Vavříková, Dzianis Hancharyk, Tereza Přerovská

Publication date: 17 May 2021

Copyright license: Creative Commons Attribution 4.0 International

Description

Yariv reagent is a set of organic compounds that bind arabinogalactan proteins via -D-(1-3)-galactan structures. Structural basis of these complexes is poorly understood. Here we provide the results of a series of molecular dynamics simulations of systems containing -D-Gal-Yariv reagent molecules and/or -D-(1-3)-linked tri- or hexasaccharide of galactose. Our motivation was to elucidate structure of Yariv-arabinogalactan assemblies.

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