Data underlying OpenPBTA Manuscript Figures and Molecular Alterations

From MaRDI portal
Dataset:6684387



DOI10.5281/zenodo.7877739Zenodo7877739MaRDI QIDQ6684387FDOQ6684387

Dataset published at Zenodo repository.

Payal Jain, Allison P. Heath, Sabine Mueller, Run Jin, Casey S. Greene, Douglas R. Stewart, Nicholas van Kuren, Mariarita Santi, Zalman Vaksman, Nighat Noureen, Yuankun Zhu, Meen Chul Kim, Rebecca S. Kaufman, Adam A. Kraya, Christopher Blackden, Bailey K. Farrow, Miguel A. Brown, Brian M. Ennis, Komal S. Rathi, Siyuan Zheng, Yang Yang, Cassie Kline, Jung Kim, Candace L Savonen, Laura Scolaro, Shannon Robins, Javad Nazarian, Pichai Raman, Pacific Pediatric Neuro-Oncology Consortium, Rishi R. Lulla, Peter J. Madsen, Daniel P. Miller, Jessica Wong, Shrivats Kannan, Joshua A. Shapiro, Eric Wafula, Chante J. Bethell, Yiran Guo, Jo Lynne Rokita, Krutika S. Gaonkar, Hongbo M. Xie, Ashley S. Margol, Phillip B. Storm, Derek Hanson, Children'S Brain Tumor Network, Mateusz P. Koptyra, Jena V. Lilly, Angela N. Viaene, Kristina A. Cole, Nhat Duong, Jaclyn N. Taroni, Jennifer L. Mason, Angela J. Waanders, Stephanie J Spielman, Adam C. Resnick, Laura E. Egolf, Brian R. Rood, Michael Prados, Carl J. Koschmann, Sharon J. Diskin, Stephen C. Mack, Bo Zhang, Xiaoyan Huang, Gregory P. Way, Noel Coleman, Tejaswi Koganti, Steven M. Foltz, Anna R. Poetsch

Publication date: 6 April 2023

Copyright license: Creative Commons Attribution 4.0 International



This upload contains CSV files that represent data contained in plots shown in the OpenPBTA manuscript. It is intended to facilitate inspection of the underlying data shown in each figure and to explicitly capture which samples are included in figures (where applicable). Please see the README included in the upload for more information about individual files. To reproduce the figures, we recommend using the code in the analysis repository: https://github.com/AlexsLemonade/OpenPBTA-analysis. Please see the figures/ directory documentation in the repository and the documentation for figure generation scripts (figures/scripts/README.md). The version of the upload corresponds to the version of the release in the analysis repository.







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