iSDAsoil: soil extractable Iron for Africa predicted at 30 m resolution at 0-20 and 20-50 cm depths
DOI10.5281/zenodo.4088216Zenodo4088216MaRDI QIDQ6688861FDOQ6688861
Dataset published at Zenodo repository.
Gifty Acquah, Milan Kilibarda, Andrew M. Sila, Josip Križan, Matt Miller, Tomislav Hengl
Publication date: 14 October 2020
Copyright license: Creative Commons Attribution 4.0 International
iSDAsoil dataset soil extractable Iron (Fe) log-transformed predicted at 30 m resolution for 020 and 2050 cm depth intervals. Data has been projected in WGS84 coordinate system and compiled as COG.Predictions have been generated using multi-scale Ensemble Machine Learning with 250 m (MODIS, PROBA-V, climatic variables and similar) and 30 m (DTM derivatives, Landsat, Sentinel-2 and similar) resolution covariates. For model training we use a pan-African compilations of soil samples and profiles (iSDA points, AfSPDB, and other national and regional soil datasets). Cite as: Hengl, T., Miller, M.A.E., Križan, J.et al.African soil properties and nutrients mapped at 30m spatial resolution using two-scale ensemble machine learning.Sci Rep11,6130 (2021). https://doi.org/10.1038/s41598-021-85639-y To open the maps in QGIS and/or directly compute with them, please use the Cloud-Optimized GeoTIFF version. Layer description: sol_log.fe_mehlich3_m_30m_*..*cm_2001..2017_v0.13_wgs84.tif = predicted soil extractable Iron mean value, sol_log.fe_mehlich3_md_30m_*..*cm_2001..2017_v0.13_wgs84.tif = predicted soil extractable Iron model (prediction) errors, Model errors were derived using bootstrapping: md is derived as standard deviation of individual learners from 5-fold cross-validation (using spatial blocking). The model 5-fold cross-validation (mlr::makeStackedLearner) for this variable indicates: Variable: log.fe_mehlich3 R-square: 0.817 Fitted values sd: 0.497 RMSE: 0.235 Random forest model: Call: stats::lm(formula = f, data = d) Residuals: Min 1Q Median 3Q Max -4.0165 -0.1312 -0.0082 0.1238 2.5077 Coefficients: Estimate Std. Error t value Pr(|t|) (Intercept) 3.913522 1.869721 2.093 0.036344 * regr.ranger 0.856893 0.007912 108.306 2e-16 * regr.xgboost 0.027856 0.007738 3.600 0.000318 * regr.cubist 0.146095 0.007230 20.207 2e-16 * regr.nnet -0.879348 0.402810 -2.183 0.029037 * regr.cvglmnet 0.005610 0.004470 1.255 0.209415 --- Signif. codes: 0 '*' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 Residual standard error: 0.2349 on 57526 degrees of freedom Multiple R-squared: 0.8173, Adjusted R-squared: 0.8173 F-statistic: 5.148e+04 on 5 and 57526 DF, p-value: 2.2e-16 To back-transform values (y) to ppm use the following formula: ppm = expm1( y / 10 ) To submit an issue or request support please visit https://isda-africa.com/isdasoil
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