iSDAsoil: soil organic carbon for Africa predicted at 30 m resolution at 0-20 and 20-50 cm depths
DOI10.5281/zenodo.4090927Zenodo4090927MaRDI QIDQ6688876FDOQ6688876
Dataset published at Zenodo repository.
Tomislav Hengl, Matt Miller, Gifty Acquah, Andrew M. Sila, Josip Križan, Milan Kilibarda
Publication date: 15 October 2020
Copyright license: Creative Commons Attribution 4.0 International
iSDAsoil dataset soil organic carbon (C) log-transformed predicted at 30 m resolution for 020 and 2050 cm depth intervals. Data has been projected in WGS84 coordinate system and compiled as COG.Predictions have been generated using multi-scale Ensemble Machine Learning with 250 m (MODIS, PROBA-V, climatic variables and similar) and 30 m (DTM derivatives, Landsat, Sentinel-2 and similar) resolution covariates. For model training we use a pan-African compilations of soil samples and profiles (iSDA points, AfSPDB, and other national and regional soil datasets). Cite as: Hengl, T., Miller, M.A.E., Križan, J.et al.African soil properties and nutrients mapped at 30m spatial resolution using two-scale ensemble machine learning.Sci Rep11,6130 (2021). https://doi.org/10.1038/s41598-021-85639-y To open the maps in QGIS and/or directly compute with them, please use the Cloud-Optimized GeoTIFF version. Layer description: sol_log.oc_mehlich3_m_30m_*..*cm_2001..2017_v0.13_wgs84.tif = predicted soil organic Carbon mean value, sol_log.oc_mehlich3_md_30m_*..*cm_2001..2017_v0.13_wgs84.tif = predicted soil organic Carbon model (prediction) errors, Model errors were derived using bootstrapping: md is derived as standard deviation of individual learners from 5-fold cross-validation (using spatial blocking). The model 5-fold cross-validation (mlr::makeStackedLearner) for this variable indicates: Variable: log.oc R-square: 0.791 Fitted values sd: 0.716 RMSE: 0.369 Random forest model: Call: stats::lm(formula = f, data = d) Residuals: Min 1Q Median 3Q Max -3.1517 -0.1900 -0.0060 0.1793 4.2621 Coefficients: Estimate Std. Error t value Pr(|t|) (Intercept) 1.821657 0.794000 2.294 0.0218 * regr.ranger 1.047507 0.005146 203.571 2e-16 * regr.xgboost -0.005943 0.005340 -1.113 0.2657 regr.cubist 0.052084 0.004884 10.664 2e-16 * regr.nnet -0.867384 0.359213 -2.415 0.0158 * regr.cvglmnet -0.050157 0.003863 -12.984 2e-16 * --- Signif. codes: 0 '*' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 Residual standard error: 0.3687 on 122457 degrees of freedom Multiple R-squared: 0.7906, Adjusted R-squared: 0.7906 F-statistic: 9.248e+04 on 5 and 122457 DF, p-value: 2.2e-16 To back-transform values (y) to g/kg use the following formula: g/kg = expm1( y / 10 ) To submit an issue or request support please visit https://isda-africa.com/isdasoil
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