iSDAsoil: soil stone content for Africa predicted at 30 m resolution at 0-20 and 20-50 cm depths
DOI10.5281/zenodo.4091154Zenodo4091154MaRDI QIDQ6688896FDOQ6688896
Dataset published at Zenodo repository.
Josip Križan, Matt Miller, Tomislav Hengl, Gifty Acquah, Milan Kilibarda, Andrew M. Sila
Publication date: 15 October 2020
Copyright license: Creative Commons Attribution 4.0 International
iSDAsoil dataset soil stone content / coarse fragments log-transformed predicted at 30 m resolution for 020 and 2050 cm depth intervals. Data has been projected in WGS84 coordinate system and compiled as COG.Predictions have been generated using multi-scale Ensemble Machine Learning with 250 m (MODIS, PROBA-V, climatic variables and similar) and 30 m (DTM derivatives, Landsat, Sentinel-2 and similar) resolution covariates. For model training we use a pan-African compilations of soil samples and profiles (iSDA points, AfSPDB, and other national and regional soil datasets). Cite as: Hengl, T., Miller, M.A.E., Križan, J.et al.African soil properties and nutrients mapped at 30m spatial resolution using two-scale ensemble machine learning.Sci Rep11,6130 (2021). https://doi.org/10.1038/s41598-021-85639-y To open the maps in QGIS and/or directly compute with them, please use the Cloud-Optimized GeoTIFF version. Layer description: sol_log.wpg2_mehlich3_m_30m_*..*cm_2001..2017_v0.13_wgs84.tif = predicted soil stone content mean value, sol_log.wpg2_mehlich3_md_30m_*..*cm_2001..2017_v0.13_wgs84.tif = predicted soil stone content model (prediction) errors, Model errors were derived using bootstrapping: md is derived as standard deviation of individual learners from 5-fold cross-validation (using spatial blocking). The model 5-fold cross-validation (mlr::makeStackedLearner) for this variable indicates: Variable: log.wpg2 R-square: 0.709 Fitted values sd: 1.25 RMSE: 0.803 Random forest model: Call: stats::lm(formula = f, data = d) Residuals: Min 1Q Median 3Q Max -4.0555 -0.3113 -0.0222 0.2378 4.5794 Coefficients: Estimate Std. Error t value Pr(|t|) (Intercept) -0.008606 1.361982 -0.006 0.995 regr.ranger 0.972265 0.004443 218.854 2e-16 * regr.xgboost 0.034649 0.006404 5.411 6.3e-08 * regr.cubist 0.069589 0.005229 13.308 2e-16 * regr.nnet -0.012756 0.796535 -0.016 0.987 regr.cvglmnet -0.056645 0.005509 -10.283 2e-16 * --- Signif. codes: 0 '*' 0.001 0.01 '*' 0.05 '.' 0.1 ' ' 1 Residual standard error: 0.8032 on 92785 degrees of freedom Multiple R-squared: 0.7092, Adjusted R-squared: 0.7092 F-statistic: 4.525e+04 on 5 and 92785 DF, p-value: 2.2e-16 To back-transform values (y) to % use the following formula: % = expm1( y / 10 ) To submit an issue or request support please visit https://isda-africa.com/isdasoil
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