iSDAsoil: soil extractable Zinc for Africa predicted at 30 m resolution at 0-20 and 20-50 cm depths
DOI10.5281/zenodo.4091171Zenodo4091171MaRDI QIDQ6688901FDOQ6688901
Dataset published at Zenodo repository.
Andrew M. Sila, Gifty Acquah, Tomislav Hengl, Josip Križan, Matt Miller, Milan Kilibarda
Publication date: 15 October 2020
Copyright license: Creative Commons Attribution 4.0 International
iSDAsoil dataset soil extractable Zinc (Zn) log-transformed predicted at 30 m resolution for 020 and 2050 cm depth intervals. Data has been projected in WGS84 coordinate system and compiled as COG.Predictions have been generated using multi-scale Ensemble Machine Learning with 250 m (MODIS, PROBA-V, climatic variables and similar) and 30 m (DTM derivatives, Landsat, Sentinel-2 and similar) resolution covariates. For model training we use a pan-African compilations of soil samples and profiles (iSDA points, AfSPDB, and other national and regional soil datasets). Cite as: Hengl, T., Miller, M.A.E., Križan, J.et al.African soil properties and nutrients mapped at 30m spatial resolution using two-scale ensemble machine learning.Sci Rep11,6130 (2021). https://doi.org/10.1038/s41598-021-85639-y To open the maps in QGIS and/or directly compute with them, please use the Cloud-Optimized GeoTIFF version. Layer description: sol_log.zn_mehlich3_m_30m_*..*cm_2001..2017_v0.13_wgs84.tif = predicted soil extractable Zinc mean value, sol_log.zn_mehlich3_md_30m_*..*cm_2001..2017_v0.13_wgs84.tif = predicted soil extractable Zinc model (prediction) errors, Model errors were derived using bootstrapping: md is derived as standard deviation of individual learners from 5-fold cross-validation (using spatial blocking). The model 5-fold cross-validation (mlr::makeStackedLearner) for this variable indicates: Variable: log.zn_mehlich3 R-square: 0.711 Fitted values sd: 0.588 RMSE: 0.375 Random forest model: Call: stats::lm(formula = f, data = d) Residuals: Min 1Q Median 3Q Max -2.1382 -0.2038 -0.0274 0.1632 3.6353 Coefficients: Estimate Std. Error t value Pr(|t|) (Intercept) 1.836394 1.555108 1.181 0.23766 regr.ranger 0.823144 0.013982 58.871 2e-16 * regr.xgboost 0.037861 0.013644 2.775 0.00552 regr.cubist 0.169653 0.010091 16.813 2e-16 * regr.nnet -1.511745 1.244933 -1.214 0.22463 regr.cvglmnet 0.009770 0.008046 1.214 0.22467 --- Signif. codes: 0 '*' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 Residual standard error: 0.3747 on 39344 degrees of freedom Multiple R-squared: 0.7109, Adjusted R-squared: 0.7109 F-statistic: 1.935e+04 on 5 and 39344 DF, p-value: 2.2e-16 To back-transform values (y) to ppm use the following formula: ppm = expm1( y / 10 ) To submit an issue or request support please visit https://isda-africa.com/isdasoil
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