EAW FASTQ files for bioinformatic courses (16S rRNA genes, 2018)

DOI10.5281/zenodo.5215815Zenodo5215815MaRDI QIDQ6690483FDOQ6690483

Dataset published at Zenodo repository.

Massimo Pindo, Adriano Boscaini, Nico Salmaso

Publication date: 18 August 2021

Copyright license: Creative Commons Attribution 4.0 International

Description

Selection of 6 samples, with 6 Forward (R1) and 6 Reverse (R2) files, including primers. R1 and R2 reads are ca. 300 bp long, and were obtained from Illumina MiSeq technologies, at the FEM facility sequencing platform. The files refer to the16S rRNA gene reads obtained from the analyses carried out on the samples collected and filtered (SterivexTM 0.22 m) in different areas and depths of Lake Garda on September, 2018 (see EAW_2018_FASTQ_16S_description.docx). Sampling and analyses were carried out in the framework of the project Eco-AlpsWater (ASP569), funded by the Interreg Alpine Space program. A bioinformatic protocol for analyzing thesedata using DADA2 is available in Zenodo: https://doi.org/10.5281/zenodo.5232772

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