FRC-QE: A robust and comparable 3D microscopy image quality metric for cleared organoids - image data
DOI10.5281/zenodo.4604685Zenodo4604685MaRDI QIDQ6691664FDOQ6691664
Dataset published at Zenodo repository.
Harald Stachelscheid, Érico Tosoni Costa, Jörg Contzen, Friedrich Preusser, Philipp Mergenthaler, Natália dos Santos, Stephan Preibisch
Publication date: 8 March 2021
Copyright license: Creative Commons Attribution 4.0 International
The ZIP file contains the image datasets that we acquired for benchmarking the FRC-QE algorithm. Data are ordered by microscope type and used clearing protocol. For experimental procedure, acquisition settings and more details see: FRC-QE: A robust and comparable 3D microscopy image quality metric for cleared organoids Friedrich Preusser*, Natlia dos Santos*,Jrg Contzen, Harald Stachelscheid, Érico Tosoni Costa, Philipp Mergenthaler#, Stephan Preibisch# Bioinformatics, DOI:10.1093/bioinformatics/btab160 FRC-QE is available on GitHub:GitHub - PreibischLab/FRC-QE Funding: This work was supported by the Bundesministerium fr Bildung und Forschung, Germany (BMBF, grant no. 031L0142A to S.P. and P.M., and in part by grants no. 16GW0191 and NUM-COVID 19 - Organo-Strat 01KX2021 to P.M. and H.S.) and HFSP grant RGP0021/2018-102 to S.P. and F.P. F.P. was funded by a PhD fellowship from Studienstiftung des deutschen Volkes. S.P. was funded by MDC Berlin and HHMI Janelia. N.S. was funded by FAPESPs program of Research Internships Abroad (BEPE, 2019/06305-4) during her visit to the Preibisch lab at the MDC Berlin. P.M. was supported by the BIH-Charit Clinical Scientist Program funded by Charit Universittsmedizin Berlin and the Berlin Institute of Health. E.T.C. was funded by the Hospital Sirio-Libanese/HSL/SBSHSL. Establishment of the Charit High Content Shared Facility was supported by the Deutsche Forschungsgemeinschaft (DFG, grant no. INST 335/591-1).
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