The metabolic domestication syndrome of budding yeast
DOI10.5281/zenodo.10680639Zenodo10680639MaRDI QIDQ6693714FDOQ6693714
Dataset published at Zenodo repository.
Michael Mülleder, João Benhur Mokochinski, Markus Ralser, Gábor Grézal, Roland Tengölics, Balázs Bálint, László Nagy, Federica Agostini, Dorottya Kalapis, Csilla Sajben, Balázs Szappanos, Balázs Papp
Publication date: 19 February 2024
Copyright license: Creative Commons Attribution 4.0 International
For a detailed description about the metabolomic measurements, see the following publication: https://doi.org/10.1073/pnas.2313354121 -ALL_AA.zip file: raw LC-MS files of amino acid measurements -All_FIA.zip file: raw LC-MS files containing untargeted metabolome data -All_TCA_cycle.zip file: raw LC-MS files of TCA cycle intemediate measurements The following files contain data in MetaboLights like format: -a_MTBLS9200_FIA-MS_negative__metabolite_profiling-1.txt pairing between sample names and filenames in untargeted metabolome profiling -a_MTBLS9200_LC-MS_alternating_hilic_metabolite_profiling.txt pairing between sample names and filenames in Amino acid level determination -a_MTBLS9200_LC-MS_negative_reverse-phase_metabolite_profiling.txt pairing between sample names and filenames in TCA cycle intemedier determination -s_MTBLS9200.txt contains sample name, cultivation batch, replicate number, genotype pairing for all the deposited data - m_MTBLS9200_FIA-MS_negative__metabolite_profiling-1_v2_maf.tsv: metabolite IDs and metabolite intensity data of untargeted metabolome measurements - m_MTBLS9200_LC-MS_alternating_hilic_metabolite_profiling_v2_maf.tsv: metabolite IDs and metabolite intensity data of amino acid measurements - m_MTBLS9200_LC-MS_negative_reverse-phase_metabolite_profiling_v2_maf.tsv: metabolite IDs and metabolite intensity data of TCA cycle intemedier measurements The following files contain the same data in a more human-readable format: - Amino_acid_determination.csv: pairing between sample names, filenames, and strain IDs for the amino acid measurements - FIA_untargeted_profiling.csv: pairing between sample names, filenames, and strain IDs for the untargeted metabolome measurements - Tengolics_PNAS_TCA.tsv: pairing between sample names, filenames, strain IDs, and species name for the TCA intermedier measurements
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