Dataset for "Environmental drivers of increased ecosystem respiration in a warming tundra"
DOI10.5281/zenodo.10572480Zenodo10572480MaRDI QIDQ6695637FDOQ6695637
Dataset published at Zenodo repository.
Marion Nyberg, Ingvild Ryde, Jan Dietrich, Judith Sarneel, Caitlin Hicks Pries, Jin-Sheng He, Johan Olofsson, Ingibjörg Svala Jónsdóttir, Nynne R. Ravn, Mark Hovenden, Hlynur Óskarsson, Josefine Walz, Ragnhild Gya, Riikka Rinnan, Michele Carbognani, Emily Pickering Pedersen, Maija E. Marushchak, Sybryn Maes, Sara Hallin, Christina Biasi, Sofie Sjogersten, Konstantin Gavazov, Mats P. Björkman, Tariq Munir, Hanna Böhner, Richard Lamprecht, Mathilde le Moullec, Sarah Schwieger, Matti Kummu, Richard van Logtestijn, Jón Guðmundsson, Henni Ylänne, Thomas C. Parker, Patrick Faubert, Sari Stark, Alessandro Petraglia, Inge Althuizen, Niels Martin Schmidt, Katrine Raundrup, Minjung Kwon, Anne Tolvanen, Gabriele Midolo, Robert G. Björk, T'Ai Forte, Vigdis Vandvik, Ji Young Jung, Mika Jalava, Ned Fetcher, Bo Elberling, Elina Kaarlejärvi, Karina E. Clemmensen, Hans Cornelissen, Jim Tang, Anders Michelsen, Yuanhe Yang, Simone Iris Lang, Carolina Voigt, Cecilie Skov Nielsen, James T. Weedon, Joseph Gaudard, Giorgio Chiari, Maria Strack, Heidi Rodenhizer, Matteo Petit bon, Ellen Dorrepaal, Elisabeth J. Cooper, Hanna Lee, Ted Schuur, Eero Myrsky, Zhen-Huan Guan, Joachim Paul Töpper, Rien Aerts, Siri V. Haugum, Jaanis Juhanson, Brage Bremset Hansen, Maria Väisänen, Casper T. Christiansen
Publication date: 29 February 2024
Copyright license: Creative Commons Attribution 4.0 International
Data forNature manuscript titled Environmental drivers of increased ecosystem respirationin a warming tundra Corresponding author Dr. Sybryn Maes sybryn.maes@gmail.com Github contains all R scripts onhttps://github.com/mjalava/tundraflux Part A. Meta-analysis Thebold names refer to scripts (see the Github repository https://github.com/mjalava/tundraflux)and names in italics refer to files in this repository df_0 -Study design Figure 1 and Extended Fig. 1 from main text df_1a -Effect size calculations of response (ER) -Links to df_1.csv file with raw flux and environmental data -Only the experiments that state Open Access in the excel file Authors_Datasets (sheet 2). For experiments stating Available Upon Request, you need to contact the authors for the -raw flux data. df_1b -Effect size calculations of environmental drivers -Links to df_1.csv file with raw flux data data (see above) and Dataset_ID.csv (this file includes all dataset IDs to merge the drivers into one dataframe) df_2a-f -Meta-analysis (2a) and meta-regression models (2b-f) (ER, N=136) -Links to df_2.csv file with effect size data and context-dependencies and Forestplot_horiz_weights_fig.csv (this file includes the mean pooled Hedges SMD as well as the individual dataset Hedges SMD to plot figure 2) -Contains code for Figs. 2-4 and Extended Figs 2-3 df_3 -Meta-regression for experimental warming duration -Contains code for Fig. 5 df_4a -Effect size calculations of autotrophic-heterotrophic respiration partitioning (Ra, Rh, N=9) -Links to df_3.csv file with raw partitioning data of subset experiments (output file df_4.csv) df_4b -Sub-meta-analysis models (ER, Ra, Rh) -Links to df_4.csv (input file) NOTES All additional input files for the meta-analysis R-scripts are included within the folders. ER, Ra, Rh = ecosystem, autotrophic, and heterotrophic respiration N = sample size (number of datasets) Part B. Upscaling results For upscaling, the input data is described in the code files (see the Github repository) and the accompanying Readme.txt. percentageChangeResp_tundraAlpine.tif: modelled change in respiration baseResp_tundraAlpine.tif: baseline respiration (calculated from the data from literature) modResp_tundraAlpine.tif: modelled respiration after warming (our calculations: (percentageChangeResp_tundraAlpine+1) * baseResp_tundraAlpine) changeResp_tundraAlpine.tif: modResp-baseResp standError_tundraAlpine.tif: standard error of modelled respiration ( standError_tundraAlpine_onlyDataUncertainty.tif: standard error of modelled respiration where only data uncertainty is taken into account
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