Phylogenetic and epidemiologic data relating to age-specific HIV incidence and transmission in Rakai, Uganda, 2003-2018.
DOI10.5281/zenodo.8412741Zenodo8412741MaRDI QIDQ6700053FDOQ6700053
Dataset published at Zenodo repository.
Joseph Kagaayi, Jackson. Jade, Shozen Dan, Ronald Gray, Maria Waver, Ronald Galiwango, Robert Ssekubugu, Joseph Ssekasanvu, Nelson Sewankambo, Simon Spencer, Steven J. Reynolds, Peter Godfrey-Faussett, Edward Nelson Kankaka, Pangea-Hiv Consortium, Victor Ssempijja, Oliver Laeyendecker, Thomas Quinn, Alexandra Pereira Blenkinsop, Christopher Fraser, Larry Chang, Andrea Brizzi, Rakai Health Sciences Program, Mary Kate Grabowski, Xiaoyue Xi, Tanya Golubchik, Melodie Monod, Godfrey Kigozi, Lucie Abeler-Dörner, David Serwadda, Yu Chen, Oliver Ratmann, Adam Akullian, Lisa Mills, John Santelli
Publication date: 17 March 2023
Copyright license: Creative Commons Attribution 4.0 International
This repository contains the data for the analyses presented in the paper Growing gender inequity in HIV infection in Africa: sources and policy implications by M. Monod, A. Brizzi, R. Galiwango, R. Ssekubugu, Y. Chen, X. Xi et al. available in the pre-printhttps://doi.org/10.1101/2023.03.16.23287351 We thank all contributors, program staff and participants to the Rakai Community Cohort Study; all members of the PANGEA-HIV consortium, the Rakai Health Sciences Program, and CDC Uganda for comments on an earlier version of the manuscript. We also extend our gratitude to the Imperial College Research Computing Service and the Biomedical Research Computing Cluster at the University of Oxford for providing the computational resources to perform this study. Additionally, we thank the Office of Cyberinfrastructure and Computational Biology at the National Institute for Allergy and Infectious Diseases for data management support; and Zulip for sponsoring team communications through the Zulip Cloud Standard chat app. All analysis code is available from https://github.com/MLGlobalHealth/phyloSI-RakaiAgeGender.
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