Adult neurogenesis improves spatial information encoding in the mouse hippocampus - RC
DOI10.5281/zenodo.10934021Zenodo10934021MaRDI QIDQ6707012FDOQ6707012
Dataset published at Zenodo repository.
M. Agustina Frechou, Kelsey McDermott, Evan A Huaman, Solen Gokhan, Wolfgang Tomé, Ruben Coen-Cagli, Sunaina S Martin, J. Tiago Gonçalves
Publication date: 5 April 2024
Copyright license: Creative Commons Attribution 4.0 International
In vivo two-photon imaging dataset for Frechou et al. "Adult neurogenesis improves spatial information encoding in the mouse hippocampus" This dataset includes data from mice that were housed in a regular cage (RC). For each recording we included raw imaging data consisting of: Individual frames (.tif files) from 3 consecutive 3 min Ca2+ imaging movies (which were concatenated for analysis) Microscope settings metadata (Experiment.xml) Mouse location data (Episode001.h5 in SyncData folder) containing rotary encoder and RFID data Some analyzed data is also included: Suite2p analysis data (Suite2p folder) fluorescence.npycontains raw fluorescence data (the F output of Suite2p data extraction). Rows are individual cells and columns are frames (i.e. timepoints) acquired at 15.253 Hz. positions.npycontains the position of the mouse on the treadmill belt indexed from 0 to 100. Both NumPy(.npy) files are the output of the Preprocessing.py code, part of the analysis pipeline used for data analysis in the original publication, which can be found at https://github.com/GoncalvesLab/Frechou-et-al-Neurogenesis Refer to the original publication for additional information. The sex of individual mice is as follows: Group Mouse # Sex RC M1 M M2 M M3 M M4 F M5 F
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