Inria Liver vessels subbranch anotomical nomenclature labels - "LIRCAD"
DOI10.5281/zenodo.13897086Zenodo13897086MaRDI QIDQ6709557FDOQ6709557
Dataset published at Zenodo repository.
Yassine MacHta, Irene E. Vignon-Clementel
Publication date: 7 October 2024
Copyright license: Creative Commons Attribution 4.0 International
This dataset contains the work for the paper : Machta, Y., Ali, O., Hakkakian, K., Vlasceanu, A., Facque, A., Golse, N., Vignon-Clementel, I. (2024). Enhancing the automatic segmentation and analysis of 3D liver vasculature models. Proceedings of MICCAI 2024 ADSMI Workshop. (https://arxiv.org/abs/2411.15778) Concact : yassine.machta@inria.fr The structure for the dataset is as follows : 3D_Liver_Vasculature_Project/ ├── CT/ │ Contains the CT scans├── Labels/ │ Contains the dual labels for the vessel tree annotations 0 background, 1 Portal vein, 2 hepatic vein ├── labeled_sub_branches/ │ Contains some of the annotated subbranches with coherent results for Portal mostly. It also contains the sub annotations for the vena tree and a combination of the two (where vena labels are added 20. The couinaud sector vessels included) │main_portal_vein, main_hepatic_vein: label= 20 │right_branch: label= 18 │left_branch: label= 19 │middle_branch: label= 17 │branch_with_left_and_right: label= 16 │branch_with_left_and_middle: label= 15 │branch_with_right_and_middle: label= 14 │Unknown: label = 30/13 Refernces: IRCAD : https://www.ircad.fr/research/data-sets/liver-segmentation-3d-ircadb-01/ LiTS: https://competitions.codalab.org/competitions/17094 Renamed lits__train-081.nii.gz to image001.nii.gzRenamed lits__train-089.nii.gz to image002.nii.gzRenamed lits__train-102.nii.gz to image003.nii.gzRenamed lits__train-012.nii.gz to image004.nii.gzRenamed lits__train-108.nii.gz to image005.nii.gzRenamed lits__train-110.nii.gz to image006.nii.gzRenamed lits__train-114.nii.gz to image007.nii.gzRenamed lits__train-024.nii.gz to image008.nii.gzRenamed lits__train-027.nii.gz to image009.nii.gzRenamed lits__train-050.nii.gz to image010.nii.gzRenamed lits__train-086.nii.gz to image011.nii.gzRenamed lits__train-087.nii.gz to image012.nii.gzRenamed lits__train-000.nii.gz to image013.nii.gzRenamed lits__train-080.nii.gz to image014.nii.gzRenamed lits__train-001.nii.gz to image015.nii.gzRenamed lits__train-082.nii.gz to image016.nii.gzRenamed lits__train-002.nii.gz to image017.nii.gzRenamed lits__train-083.nii.gz to image018.nii.gzRenamed lits__train-003.nii.gz to image019.nii.gzRenamed lits__train-005.nii.gz to image020.nii.gzRenamed lits__train-090.nii.gz to image021.nii.gzRenamed lits__train-006.nii.gz to image022.nii.gzRenamed lits__train-100.nii.gz to image023.nii.gzRenamed lits__train-007.nii.gz to image024.nii.gzRenamed lits__train-101.nii.gz to image025.nii.gzRenamed lits__train-008.nii.gz to image026.nii.gzRenamed lits__train-009.nii.gz to image027.nii.gzRenamed lits__train-103.nii.gz to image028.nii.gzRenamed lits__train-010.nii.gz to image029.nii.gzRenamed lits__train-105.nii.gz to image030.nii.gzRenamed lits__train-013.nii.gz to image031.nii.gzRenamed lits__train-014.nii.gz to image032.nii.gzRenamed lits__train-112.nii.gz to image033.nii.gzRenamed lits__train-021.nii.gz to image034.nii.gzRenamed lits__train-115.nii.gz to image035.nii.gzRenamed lits__train-023.nii.gz to image036.nii.gzRenamed lits__train-025.nii.gz to image037.nii.gzRenamed lits__train-048.nii.gz to image038.nii.gzRenamed lits__train-049.nii.gz to image039.nii.gzRenamed lits__train-052.nii.gz to image040.nii.gzRenamed lits__train-054.nii.gz to image041.nii.gzRenamed lits__train-055.nii.gz to image042.nii.gzRenamed lits__train-056.nii.gz to image043.nii.gzRenamed lits__train-059.nii.gz to image044.nii.gzRenamed lits__train-061.nii.gz to image045.nii.gzRenamed lits__train-062.nii.gz to image046.nii.gzRenamed lits__train-065.nii.gz to image047.nii.gzRenamed lits__train-066.nii.gz to image048.nii.gzRenamed lits__train-070.nii.gz to image049.nii.gzRenamed lits__train-071.nii.gz to image050.nii.gzRenamed lits__train-075.nii.gz to image051.nii.gzRenamed lits__train-077.nii.gz to image052.nii.gzRenamed lits__train-078.nii.gz to image053.nii.gz --LiTS second btach (manually corrected) Renamed lits__train-011.nii.gz to image074.nii.gzRenamed lits__train-058.nii.gz to image075.nii.gzRenamed lits__train-064.nii.gz to image076.nii.gzRenamed lits__train-088.nii.gz to image077.nii.gz---- IRCAD ----Renamed image_001.nii.gz to image054.nii.gzRenamed image_002.nii.gz to image055.nii.gzRenamed image_003.nii.gz to image056.nii.gzRenamed image_004.nii.gz to image057.nii.gzRenamed image_005.nii.gz to image058.nii.gzRenamed image_006.nii.gz to image059.nii.gzRenamed image_007.nii.gz to image060.nii.gzRenamed image_008.nii.gz to image061.nii.gzRenamed image_009.nii.gz to image062.nii.gzRenamed image_010.nii.gz to image063.nii.gzRenamed image_011.nii.gz to image064.nii.gzRenamed image_012.nii.gz to image065.nii.gzRenamed image_013.nii.gz to image066.nii.gzRenamed image_014.nii.gz to image067.nii.gzRenamed image_015.nii.gz to image068.nii.gzRenamed image_016.nii.gz to image069.nii.gzRenamed image_017.nii.gz to image070.nii.gzRenamed image_018.nii.gz to image071.nii.gzRenamed image_019.nii.gz to image072.nii.gzRenamed image_020.nii.gz to image073.nii.gz
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