CAbiNet: Joint visualization of cells and genes based on a gene-cell graph

DOI10.5281/zenodo.7433294Zenodo7433294MaRDI QIDQ6710089FDOQ6710089

Dataset published at Zenodo repository.

Clemens Kohl, Martin Vingron, Yan Zhao

Publication date: 19 December 2022

Copyright license: Creative Commons Attribution 4.0 International

Description

We here provide the data sets to reproduce the results in our manuscript CAbiNet: Joint visualization of cells and genes based on a gene-cell association graph. The code to reproduce our analysis with the data sets provided here can be found at: https://github.com/VingronLab/CAbiNet_paper. You can find three types of data here: raw data, preprocessed data, and benchmarking results. Tips for downloading the data: - If you want to reproduce all the results in our paper from the beginning to the end, please download the rawdata.zip and disscussed_data.zip . Then you can go through our codes. - If you only want to reproduce the figures shown in the paper, please download the discussed_data.zip and benchmarking.zip.

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