Differential expression of single-cell RNA-seq data using Tweedie models

DOI10.1002/SIM.9430MaRDI QIDQ6628654zbMATH OpenFDO

Authors Himel Mallick, Suvo Chatterjee, Shrabanti Chowdhury, Saptarshi Chatterjee

Publication date 29 October 2024

Published in Statistics in Medicine (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1002/SIM.9430

zbMATH Keywords

differential expressionexponential dispersion modelgeneralized linear modelsingle-cell RNA-sequencingTweedie distributionzero-inflation

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10)

Cites work

• Detection of differentially expressed genes in discrete single‐cell RNA sequencing data using a hurdle model with correlated random effects
• Flexible Tweedie regression models for continuous data
• scientific article; zbMATH DE number 4082773 (Why is no real title available?)
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• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• Likelihood-based and Bayesian methods for Tweedie compound Poisson linear mixed models
• The control of the false discovery rate in multiple testing under dependency.

Cited in

(1)

• An integrated Bayesian framework for multi-omics prediction and classification

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