Directed graphs of DNA sequences and their numerical characterization

DOI10.1016/J.JTBI.2005.11.023MaRDI QIDQ2199174zbMATH OpenOpenAlexWikidataFDO

Authors Yanyan Li

Publication date 16 September 2020

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2005.11.023

zbMATH Keywords

directed graphDNAinvariantupper triangular matrix

Mathematics Subject Classification ID

Directed graphs (digraphs), tournaments (05C20) Protein sequences, DNA sequences (92D20)

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Cited in

(16)

• New method for comparing DNA primary sequences based on a discrimination measure
• Similarity analysis for DNA sequences based on chaos game representation. Case study: the albumin
• Phylogenetic analysis of DNA sequences based on \(k\)-word and rough set theory
• C-curve: a novel 3D graphical representation of DNA sequence based on codons
• \(C(i, j)\) matrix: a better numerical characterization for graphical representations of biological sequences
• Descriptors of 2D-dynamic graphs as a classification tool of DNA sequences
• A representation of DNA primary sequences by random walk
• scientific article; zbMATH DE number 5951415 (Why is no real title available?)
• Novel numerical characterization and analysis of similarity of DNA sequences
• A numerical characterization of modified Hamori curve representation of DNA sequences
• Graphs for representing statistics indexed by nucleotide or amino acid sequences
• scientific article; zbMATH DE number 6282157 (Why is no real title available?)
• Numerical characterization of DNA sequences: Connectivity type indices derived from DNA line graphs
• Vector representations and related matrices of DNA primary sequence based on \(L\)-tuple
• On the minimum number of topologies explaining a sample of DNA sequences
• On property of the invariant of graphical representations of DNA sequences

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