ECMDB2.0 MetFrag Local CSV

DOI10.5281/zenodo.3735703Zenodo3735703MaRDI QIDQ6705567FDOQ6705567

Dataset published at Zenodo repository.

Todor Kondic, Emma Schymanski

Publication date: 1 April 2020

Copyright license: Creative Commons Attribution 4.0 International

Description

This is a local CSV file of ECMDB 2.0 (http://ecmdb.ca/) for MetFrag (https://msbi.ipb-halle.de/MetFrag/). Data was extracted to CSV from the SDF, with column headers for compulsory fields adjusted to fit the MetFrag format. This file is for users wanting to integrate the latest ECMDB into MetFrag CL workflows (offline), this file will be integrated into MetFrag online; please use the file in the dropdown menu rather than uploading this one. The ECMDB is an expertly curated database containing extensive metabolomic data and metabolic pathway diagrams about Escherichia coli (strain K12, MG1655). This database includes significant quantities of original data compiled by members of the Wishart laboratory as well as additional material derived from hundreds of textbooks, scientific journals, metabolic reconstructions and other electronic databases.

This page was built for dataset: ECMDB2.0 MetFrag Local CSV