fMRIscrub

MaRDI QIDQ79506CRANFDO

Authors Damon Đ Phạm, Amanda F. Mejia, John Muschelli

Last update 25 October 2023

Copyright license GNU General Public License, version 3.0

Software version identifier 0.12.1, 0.8.2, 0.8.6, 0.11.2, 0.13.0, 0.14.4, 0.14.5

Description

Data-driven fMRI denoising with projection scrubbing (Pham et al (2022) <doi:10.1016/j.neuroimage.2023.119972>). Also includes routines for DVARS (Derivatives VARianceS) (Afyouni and Nichols (2018) <doi:10.1016/j.neuroimage.2017.12.098>), motion scrubbing (Power et al (2012) <doi:10.1016/j.neuroimage.2011.10.018>), aCompCor (anatomical Components Correction) (Muschelli et al (2014) <doi:10.1016/j.neuroimage.2014.03.028>), detrending, and nuisance regression. Projection scrubbing is also applicable to other outlier detection tasks involving high-dimensional data.

Cites work

• Less is more: balancing noise reduction and data retention in fMRI with data-driven scrubbing
• Insight and inference for DVARS
• Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion
• Reduction of motion-related artifacts in resting state fMRI using aCompCor

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