Factorization of the translation kernel for fast rigid image alignment

DOI10.1088/1361-6420/AB4E66MaRDI QIDQ5213330zbMATH OpenOpenAlexFDO

Authors Aaditya V. Rangan, Marina Spivak, Joakim Andén, Alex H. Barnett

Publication date 3 February 2020

Published in Inverse Problems (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1905.12317

zbMATH Keywords

Fourier-Bessel basisinterpolationrigid image alignmentsingle-particle electron cryomicroscopysingular value decomposition

Mathematics Subject Classification ID

Numerical methods for discrete and fast Fourier transforms (65T50) Computing methodologies for image processing (68U10) Biomedical imaging and signal processing (92C55) Image processing (compression, reconstruction, etc.) in information and communication theory (94A08)

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Cites work

• A Parallel Nonuniform Fast Fourier Transform Library Based on an “Exponential of Semicircle" Kernel
• A Review of Image Denoising Algorithms, with a New One
• Accelerating the Nonuniform Fast Fourier Transform
• Deblurring of class-averaged images in single-particle electron microscopy
• Fast Fourier Transforms for Nonequispaced Data
• scientific article; zbMATH DE number 1012640 (Why is no real title available?)
• scientific article; zbMATH DE number 6159604 (Why is no real title available?)
• scientific article; zbMATH DE number 3288044 (Why is no real title available?)
• Image Alignment and Stitching: A Tutorial
• NIST handbook of mathematical functions
• Orientation determination of cryo-EM images using least unsquared deviations
• Polynomial Expansions of Bessel Functions and Some Associated Functions
• Rapid solution of the cryo-EM reconstruction problem by frequency marching
• Using NFFT 3 -- a software library for various nonequispaced fast Fourier transforms
• Viewing direction estimation in cryo-EM using synchronization

Cited in

(8)

• Estimation of horizontal and vertical translations of large images based on columns and rows mean energy matching
• Hyper-molecules: on the representation and recovery of dynamical structures for applications in flexible macro-molecules in cryo-EM
• Radial recombination for rigid rotational alignment of images and volumes
• Local-Adaptive Image Alignment Based on Triangular Facet Approximation
• Fast Expansion into Harmonics on the Disk: A Steerable Basis with Fast Radial Convolutions
• Asymptotically steerable finite Fourier-Bessel transforms and closure under convolution
• A nonuniform fast Hankel transform
• Fast rigid alignment of heterogeneous images in sliced Wasserstein distance

Describes a project that uses

Uses Software

• NFFT3
• Cryo-EM
• FREALIGN
• cryoSPARC
• NFFT
• EMan
• FINUFFT
• DLMF

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