fdapace
A versatile package that provides implementation of various methods of Functional Data Analysis (FDA) and Empirical Dynamics. The core of this package is Functional Principal Component Analysis (FPCA), a key technique for functional data analysis, for sparsely or densely sampled random trajectories and time courses, via the Principal Analysis by Conditional Estimation (PACE) algorithm. This core algorithm yields covariance and mean functions, eigenfunctions and principal component (scores), for both functional data and derivatives, for both dense (functional) and sparse (longitudinal) sampling designs. For sparse designs, it provides fitted continuous trajectories with confidence bands, even for subjects with very few longitudinal observations. PACE is a viable and flexible alternative to random effects modeling of longitudinal data. There is also a Matlab version (PACE) that contains some methods not available on fdapace and vice versa. Updates to fdapace were supported by grants from NIH Echo and NSF DMS-1712864 and DMS-2014626. Please cite our package if you use it (You may run the command citation("fdapace") to get the citation format and bibtex entry). References: Wang, J.L., Chiou, J., Müller, H.G. (2016) <doi:10.1146/annurev-statistics-041715-033624>; Chen, K., Zhang, X., Petersen, A., Müller, H.G. (2017) <doi:10.1007/s12561-015-9137-5>.
- fdadensity
- WRI
- fdaPOIFD
- KFPCA
- fdapaceShiny
- frechet
- SLFPCA
- smcDE
- mtsdi
- Rainbow
- fgm
- fda (R)
- refund
- fdaMixed
- Efficient estimation for varying-coefficient mixed effects models with functional response data
- Bagging-enhanced sampling schedule for functional quadratic regression
- Optimal Bayesian smoothing of functional observations over a large graph
- The completion of covariance kernels
- Learning delay dynamics for multivariate stochastic processes, with application to the prediction of the growth rate of COVID-19 cases in the United States
- Design optimal sampling plans for functional regression models
- LaGriT
- fda.usc
- AneuRisk65
- ftsa
- GPFDA
- FDboost
- MFPCA
- funreg
- roahd
- fdatest
- fdasrvf
- funData
- Funclustering
- fpca
- sparseFLMM
- RFgroove
- refund.wave
- face
- PACE
- its
- PACE
- goffda
- scikit-fda
- FDApy
- mvis
- fdaoutlier
- covcomp
- KerUTest
- rOpenSci
- localFDA
- MJMbamlss
- mrct
- longke
- mvfmr
- fdarep
- funcharts
- Robust functional principal components for sparse longitudinal data
- longsurr
- fdaconcur
This page was built for software: fdapace
