Finding all sorting tandem duplication random loss operations

DOI10.1016/J.JDA.2010.09.006MaRDI QIDQ533407zbMATH OpenOpenAlexFDO

Authors Matthias Bernt, Kuan-Yu Chen, Ming-Chiang Chen, An-Chiang Chu, Daniel Merkle, Hung-Lung Wang, Kun-Mao Chao, Martin Middendorf

Publication date 3 May 2011

Published in Journal of Discrete Algorithms (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jda.2010.09.006

zbMATH Keywords

permutationgenome rearrangementTDRL

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10) Problems related to evolution (92D15) Computational methods for problems pertaining to biology (92-08)

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Cites work

• scientific article; zbMATH DE number 1263193 (Why is no real title available?)
• scientific article; zbMATH DE number 1945172 (Why is no real title available?)
• scientific article; zbMATH DE number 910920 (Why is no real title available?)
• A variant of the tandem duplication-random loss model of genome rearrangement
• Approximating the true evolutionary distance between two genomes
• Duplication, rearrangement, and reconciliation
• Finding All Sorting Tandem Duplication Random Loss Operations
• On the tandem duplication-random loss model of genome rearrangement
• Shuffling Cards and Stopping Times
• The duplication/random loss model for gene rearrangement exemplified by mitochondrial genomes of deuterostome animals
• Trailing the dovetail shuffle to its lair

Cited in

(4)

• The duplication/random loss model for gene rearrangement exemplified by mitochondrial genomes of deuterostome animals
• Approximating the number of double cut-and-join scenarios
• Sorting signed permutations by tandem duplication random loss and inverse tandem duplication random loss
• Finding All Sorting Tandem Duplication Random Loss Operations

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