FlyCircuit Dotprops

DOI10.5281/zenodo.5205616Zenodo5205616MaRDI QIDQ6681369FDOQ6681369

Dataset published at Zenodo repository.

Gregory Jefferis, Marta Costa, Philipp Schlegel

Publication date: 30 June 2016

Copyright license: Creative Commons Attribution 4.0 International

Description

Dotprops for FlyCircuit neurons published in Costa et al. (2016). In brief, ~16k confocal images from the FlyCircuit dataset (Chiang et al., 2011) were registered (Jefferis et al., 2007) to an intersex template brain (FCWB, Costa et al. 2016), skeletonised and converted to dotprops using the R package nat (Bates et al., 2020). Dotprops represent neurons as points with associated tangent vectors (i.e. local headings). See Costa et al. (2016) for further details. Contents: flycircuit_dotprops.zipcontains 16,129dotprops as individual CSV files. File names correspond to FlyCircuit gene names. Units are in microns and neurons are in FCWB (FlyCircuit Whole Brain) template space. meta.csvcontains a mapping between FlyCircuit gene and neuron names, and an integer identifier. See also nat.flycircuitfor ready access to these dotprops and additional meta data.

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