greed

MaRDI QIDQ1353134swMATHCRANFDO

Authors Etienne Côme, Nicolas Jouvin

Last update 29 August 2025

Copyright license GNU General Public License, version 2.0, GNU General Public License, version 3.0

Software version identifier 0.6.1, PACKAGES.rds, 0.5.0, 0.5.1, 0.6.0, 0.6.1, 0.6.2

Official website https://cran.r-project.org/package=greed

Source code repository https://github.com/cran/greed

Description

An ensemble of algorithms that enable the clustering of networks and data matrices (such as counts, categorical or continuous) with different type of generative models. Model selection and clustering is performed in combination by optimizing the Integrated Classification Likelihood (which is equivalent to minimizing the description length). Several models are available such as: Stochastic Block Model, degree corrected Stochastic Block Model, Mixtures of Multinomial, Latent Block Model. The optimization is performed thanks to a combination of greedy local search and a genetic algorithm (see <arXiv:2002:11577> for more details).

Cites work

• Hierarchical clustering with discrete latent variable models and the integrated classification likelihood

Described by source

• Hierarchical clustering with discrete latent variable models and the integrated classification likelihood

Cited in

(14)

• sbm
• Hybrid maximum likelihood inference for stochastic block models
• future
• KronFit
• cliques
• adjclust
• blockmodels
• CORALS
• MultilayerExtraction
• bikm1
• TensorClus
• SparseBM
• mixedClust
• MetaPhlAn

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