Hierarchical species sampling models
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Abstract: This paper introduces a general class of hierarchical nonparametric prior distributions. The random probability measures are constructed by a hierarchy of generalized species sampling processes with possibly non-diffuse base measures. The proposed framework provides a general probabilistic foundation for hierarchical random measures with either atomic or mixed base measures and allows for studying their properties, such as the distribution of the marginal and total number of clusters. We show that hierarchical species sampling models have a Chinese Restaurants Franchise representation and can be used as prior distributions to undertake Bayesian nonparametric inference. We provide a method to sample from the posterior distribution together with some numerical illustrations. Our class of priors includes some new hierarchical mixture priors such as the hierarchical Gnedin measures, and other well-known prior distributions such as the hierarchical Pitman-Yor and the hierarchical normalized random measures.
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Cites work
- A hierarchical Dirichlet process mixture model for haplotype reconstruction from multi-popu\-la\-tion data
- A probabilistic interpretation of the Macdonald polynomials
- A segmented topic model based on the two-parameter Poisson-Dirichlet process
- A species sampling model with finitely many types
- Bayesian Density Estimation and Inference Using Mixtures
- Bayesian linear regression with sparse priors
- Bayesian nonparametric inference beyond the Gibbs-type framework
- Bayesian nonparametric sparse VAR models
- Bayesian nonparametric vector autoregressive models
- Bayesian Nonparametrics
- Bayesian prediction with multiple-samples information
- Beta-product dependent Pitman-Yor processes for Bayesian inference
- Borrowing strengh in hierarchical Bayes: posterior concentration of the Dirichlet base measure
- Combinatorial stochastic processes. Ecole d'Eté de Probabilités de Saint-Flour XXXII -- 2002.
- Distribution theory for hierarchical processes
- Estimating Normal Means with a Dirichlet Process Prior
- Exchangeable and partially exchangeable random partitions
- Forecasting Using Principal Components From a Large Number of Predictors
- Hierarchical Dirichlet Processes
- Hierarchical normalized completely random measures for robust graphical modeling
- scientific article; zbMATH DE number 3718912 (Why is no real title available?)
- scientific article; zbMATH DE number 1324455 (Why is no real title available?)
- scientific article; zbMATH DE number 2017734 (Why is no real title available?)
- scientific article; zbMATH DE number 2214054 (Why is no real title available?)
- Logarithmic combinatorial structures: A probabilistic approach
- MCMC for normalized random measure mixture models
- Mixture models with a prior on the number of components
- Modeling individual differences using Dirichlet processes
- Nonparametric Bayesian topic modelling with the hierarchical Pitman-Yor processes
- On the Asymptotic Distribution of Large Prime Factors
- On the Pitman–Yor process with spike and slab base measure
- Partition structures, Polya urns, the Ewens sampling formula, and the ages of alleles
- Pólya-like urns and the Ewens' sampling formula
- Probabilistic Symmetries and Invariance Principles
- Random partition models with regression on covariates
- Retrospective Markov chain Monte Carlo methods for Dirichlet process hierarchical models
- Sampling the Dirichlet Mixture Model with Slices
- Semiparametric Bayesian Inference in Autoregressive Panel Data Models
- Slice sampling mixture models
- Some developments of the normalized random measures with independent increments
- Spiked Dirichlet process prior for Bayesian multiple hypothesis testing in random effects models
- Stick-breaking autoregressive processes
- Sufficientness postulates for Gibbs-type priors and hierarchical generalizations
- The sampling theory of selectively neutral alleles
- The spike-and-slab LASSO
- The two-parameter Poisson-Dirichlet distribution derived from a stable subordinator
Cited in
(26)- Dependent species sampling models for spatial density estimation
- Distribution theory for hierarchical processes
- Asymptotics for a Bayesian nonparametric estimator of species variety
- Asymptotic behavior of the number of distinct values in a sample from the geometric stick-breaking process
- Nonparametric Bayesian multiarmed bandits for single-cell experiment design
- Sampling hierarchies of discrete random structures
- On the topological support of species sampling priors
- Species sampling priors for modeling dependence: an application to the detection of chromosomal aberrations
- A class of normalized random measures with an exact predictive sampling scheme
- scientific article; zbMATH DE number 2042826 (Why is no real title available?)
- Bayesian nonparametric inference beyond the Gibbs-type framework
- Correlated random measures
- On species sampling sequences induced by residual allocation models
- Generalized species sampling priors with latent beta reinforcements
- scientific article; zbMATH DE number 6774527 (Why is no real title available?)
- Hierarchical Mixture Modeling With Normalized Inverse-Gaussian Priors
- Explaining species distribution patterns through hierarchical modeling
- The semi-hierarchical Dirichlet process and its application to clustering homogeneous distributions
- Perfect sampling of the posterior in the hierarchical Pitman-Yor process
- Gibbs Priors for Bayesian Nonparametric Variable Selection with Weak Learners
- A Bayesian nonparametric approach for clustering functional trajectories over time
- Hierarchical mixture of finite mixtures
- Blocked Gibbs Sampler for Hierarchical Dirichlet Processes
- Dynamic functional variable selection for multimodal mHealth data
- Graph-Aligned Random Partition Model (GARP)
- Gaussian Process Vector Autoregressions and Macroeconomic Uncertainty
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