hmde

Authors Daniel Falster, Tess O'Brien, David I. Warton

Last update 4 May 2026

Copyright license GNU General Public License

Software version identifier PACKAGES.rds, 1.2.1, 1.2.2, 1.3.1, 1.3, 1.4.0

Description

Wrapper for 'Stan' that offers a number of in-built models to implement a hierarchical Bayesian longitudinal model for repeat observation data. Model choice selects the differential equation that is fit to the observations. Single and multi-individual models are available. O'Brien et al. (2024) <doi:10.1111/2041-210X.14463>.

Cites work

Yes, they're all individuals: Hierarchical models for repeat survey data improve estimates of tree growth and size

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