Integrating quantitative information from ChIP-chip experiments into motif finding

DOI10.1093/BIOSTATISTICS/KXM014MaRDI QIDQ3634569zbMATH OpenOpenAlexWikidataFDO

Authors Heejung Shim, Sunduz Keles

Publication date 25 June 2009

Published in Biostatistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1093/biostatistics/kxm014

zbMATH Keywords

ChIP-chip dataconditional mixture modelspiecewise constant linear regressionprior modelsregulatory motif findingtiling microarrays

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)

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Cited in

(3)

• Mixture Modeling for Genome‐Wide Localization of Transcription Factors
• ChIP‐chip: Data, Model, and Analysis
• A Bayesian hidden Markov model for motif discovery through joint modeling of genomic sequence and ChIP-chip data

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