TBRDist (Q134752)

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Rearrangement Distances Between Phylogenetic Trees
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    TBRDist
    Rearrangement Distances Between Phylogenetic Trees

      Statements

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      1.0.2
      17 September 2020
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      PACKAGES.rds
      2 September 2026
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      1.0.0
      1 July 2020
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      1.0.1
      7 July 2020
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      1.0.3
      28 November 2025
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      2.0.0
      30 March 2026
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      2.0.1
      21 July 2026
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      2.0.2
      2 September 2026
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      2 September 2026
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      Fast calculation of tree rearrangement distances. For unrooted trees: Subtree Prune and Regraft (SPR), Tree Bisection and Reconnection (TBR), and Replug distances, using the algorithms of Whidden and Matsen (2017) <doi:10.48550/arXiv.1511.07529>. For rooted trees: rooted SPR (rSPR) distance, using the fixed-parameter algorithms of Whidden, Beiko, and Zeh (2013) <doi:10.1137/110845045>.
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