DDRTree (Q154241)

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Learning Principal Graphs with DDRTree
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    DDRTree
    Learning Principal Graphs with DDRTree

      Statements

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      0.1.5
      30 April 2017
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      0.1.3
      2 February 2016
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      0.1.4
      26 July 2016
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      PACKAGES.rds
      9 July 2026
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      0.1.6
      3 March 2026
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      3 March 2026
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      Provides an implementation of the framework of reversed graph embedding (RGE) which projects data into a reduced dimensional space while constructs a principal tree which passes through the middle of the data simultaneously. DDRTree shows superiority to alternatives (Wishbone, DPT) for inferring the ordering as well as the intrinsic structure of the single cell genomics data. In general, it could be used to reconstruct the temporal progression as well as bifurcation structure of any datatype.
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      Cole Trapnell
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      Qi Mao
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      Li Wang
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