PRECAST (Q62564)

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Embedding and Clustering with Alignment for Spatial Omics Datasets
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    PRECAST
    Embedding and Clustering with Alignment for Spatial Omics Datasets

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      1.5
      23 March 2023
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      1.6
      18 April 2023
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      1.0
      22 June 2022
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      1.1
      29 June 2022
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      1.2
      12 July 2022
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      1.3
      18 October 2022
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      1.4
      11 February 2023
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      1.6.2
      9 August 2023
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      1.6.3
      6 November 2023
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      1.6.4
      25 January 2024
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      PACKAGES.rds
      9 July 2026
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      1.6.5
      19 March 2024
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      1.6.6
      27 March 2025
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      1.7
      1 October 2025
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      1.8
      15 December 2025
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      1.9
      5 June 2026
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      An efficient data integration method is provided for multiple spatial transcriptomics data with non-cluster-relevant effects such as the complex batch effects. It unifies spatial factor analysis simultaneously with spatial clustering and embedding alignment, requiring only partially shared cell/domain clusters across datasets. More details can be referred to Wei Liu, et al. (2023) <doi:10.1038/s41467-023-35947-w>.
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      Yi Yang
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      5 June 2026
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