Reproduce results from: Gaskin, Conrad et al. (2024); figure 3 (Q6830877)
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| English | Reproduce results from: Gaskin, Conrad et al. (2024); figure 3 |
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9 April 2026
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A **Snakemake** workflow that reproduces Figure 3 from Gaskin, Conrad et al. (2024), showing the uncertainty envelope of RKI COVID-19 daily case numbers for the period March–October 2020. The workflow fetches the case count dataset from the MaRDI data store via DOIP and applies a rolling-window uncertainty quantification method implemented in **Python** using **pandas** and **matplotlib**. The result is a shaded envelope plot illustrating the sensitivity of the reported case trajectory to reporting delays and data revisions. All software dependencies are pinned in a conda environment file, enabling exact reproduction of the figure.\N\N### Main steps\N\N**download_input** — fetches the case count CSV (Q6830878) from the MaRDI DOIP server.\N\N**generate_figure** — runs the Python script to compute the rolling-window envelope and render figure3.png.
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