sccore (Q69994)
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Core Utilities for Single-Cell RNA-Seq
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | sccore |
Core Utilities for Single-Cell RNA-Seq |
Statements
23 February 2024
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Core utilities for single-cell RNA-seq data analysis. Contained within are utility functions for working with differential expression (DE) matrices and count matrices, a collection of functions for manipulating and plotting data via 'ggplot2', and functions to work with cell graphs and cell embeddings. Graph-based methods include embedding kNN cell graphs into a UMAP <doi:10.21105/joss.00861>, collapsing vertices of each cluster in the graph, and propagating graph labels.
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