TiPS (Q73731)
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Trajectories and Phylogenies Simulator
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | TiPS |
Trajectories and Phylogenies Simulator |
Statements
expanded from: GPL (≥ 2) (English)
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9 May 2025
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Generates stochastic time series and genealogies associated with a population dynamics model. Times series are simulated using the Gillespie exact and approximate algorithms and a new algorithm we introduce that uses both approaches to optimize the time execution of the simulations. Genealogies are simulated from a trajectory using a backwards-in-time based approach. Methods are described in Danesh G et al (2022) <doi:10.1111/2041-210X.14038>.
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