gateR (Q78215)

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Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
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English
gateR
Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation

    Statements

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    0.1.13
    1 February 2023
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    0.1.2
    10 November 2020
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    0.1.3
    17 November 2020
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    0.1.4
    30 November 2020
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    0.1.6
    7 January 2021
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    0.1.7
    4 February 2021
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    0.1.8
    15 March 2021
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    0.1.9
    26 June 2021
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    0.1.10
    5 February 2022
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    0.1.11
    27 August 2022
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    0.1.12
    1 December 2022
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    0.1.13
    2 February 2023
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    0.1.15
    23 January 2024
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    23 January 2024
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    Estimates statistically significant marker combination values within which one immunologically distinctive group (i.e., disease case) is more associated than another group (i.e., healthy control), successively, using various combinations (i.e., "gates") of markers to examine features of cells that may be different between groups. For a two-group comparison, the 'gateR' package uses the spatial relative risk function estimated using the 'sparr' package. Details about the 'sparr' package methods can be found in the tutorial: Davies et al. (2018) <doi:10.1002/sim.7577>. Details about kernel density estimation can be found in J. F. Bithell (1990) <doi:10.1002/sim.4780090616>. More information about relative risk functions using kernel density estimation can be found in J. F. Bithell (1991) <doi:10.1002/sim.4780101112>.
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    ≥ 2.0 (English)
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