Jacquard

MaRDI QIDQ7386910CRANFDO

Authors Jan Graffelman

Last update 17 September 2024

Copyright license GNU General Public License, version 2.0, GNU General Public License, version 3.0

Software version identifier 1.0.2

Description

Contains procedures to estimate the nine condensed Jacquard genetic identity coefficients (Jacquard, 1974) <doi:10.1007/978-3-642-88415-3> by constrained least squares (Graffelman et al., 2024) <doi:10.1101/2024.03.25.586682> and by the method of moments (Csuros, 2014) <doi:10.1016/j.tpb.2013.11.001>. These procedures require previous estimation of the allele frequencies. Functions are supplied that estimate relationship parameters that derive from the Jacquard coefficients, such as individual inbreeding coefficients and kinship coefficients.

Cites work

• Estimation of Jacquard’s genetic identity coefficients with bi-allelic variants by constrained least-squares
• Non-identifiability of identity coefficients at biallelic loci
• The Genetic Structure of Populations

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