Joint genome-wide prediction in several populations accounting for randomness of genotypes: a hierarchical Bayes approach. I: Multivariate Gaussian priors for marker effects and derivation of the joint probability mass function of genotypes

DOI10.1016/J.JTBI.2016.12.020MaRDI QIDQ2399621zbMATH OpenOpenAlexWikidataFDO

Authors Carlos Alberto Martínez, Kshitij Khare, Arunava Banerjee, Mauricio Elzo

Publication date 24 August 2017

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2016.12.020

zbMATH Keywords

Bayesian modelingdistribution of genotypesacross population genome-enabled predictionheterogeneous allelic frequencies

Mathematics Subject Classification ID

Bayesian inference (62F15) Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10)

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Cites work

• Bayesian Measures of Model Complexity and Fit
• Incorporating genetic heterogeneity in whole-genome regressions using interactions
• Introducing Monte Carlo Methods with R
• On the Bayesness, minimaxity and admissibility of point estimators of allelic frequencies
• The Deviance Information Criterion: 12 Years on

Cited in

(5)

• Modeling correlated marker effects in genome-wide prediction via Gaussian concentration graph models
• An integrated approach to empirical Bayesian whole genome prediction modeling
• Genomic prediction models for count data
• Incorporating genetic heterogeneity in whole-genome regressions using interactions
• Joint genome-wide prediction in several populations accounting for randomness of genotypes: a hierarchical Bayes approach. II: Multivariate spike and slab priors for marker effects and derivation of approximate Bayes and fractional Bayes factors for the complete family of models

Describes a project that uses

Uses Software

• BayesDA
• R

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