Knowledge acquisition and development of accurate rules for predicting protein stability changes

DOI10.1016/J.COMPBIOLCHEM.2006.06.004MaRDI QIDQ884265zbMATH OpenOpenAlexWikidataFDO

Authors Liang-Tsung Huang, M. Michael Gromiha, Shiow-Fen Hwang, Shinn-Ying Ho

Publication date 13 June 2007

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2006.06.004

zbMATH Keywords

BioinformaticsData miningDecision treesPredictionProtein stability

Mathematics Subject Classification ID

Knowledge representation (68T30) Artificial intelligence (68T99) Computational methods for problems pertaining to biology (92-08) Biophysics (92C05) Biochemistry, molecular biology (92C40)

Recommendations

• Relative importance of secondary structure and solvent accessibility to the stability of protein mutants. A case study with amino acid properties and energetics on T4 and human lysozymes
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Cites work

• A decision-theoretic generalization of on-line learning and an application to boosting
• Relative importance of secondary structure and solvent accessibility to the stability of protein mutants. A case study with amino acid properties and energetics on T4 and human lysozymes

Cited in

(4)

• Quantitative prediction of the thermal motion and intrinsic disorder of protein cofactors in crystalline state: a case study on halide anions
• Prediction of potential thermostable proteins in \textit{Xylella fastidiosa}
• NEW METHOD OF EVALUATING RELATIVE THERMAL STABILITIES OF PROTEINS BASED ON THEIR AMINO ACID SEQUENCES: TARGETSTAR
• Probabilistic Assessment of a Pentapeptide Composition Influence on Its Stability

Describes a project that uses

Uses Software

• C4.5
• AdaBoost.MH

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