Learning the language of biological sequences

DOI10.1007/978-3-662-48395-4_8MaRDI QIDQ2963599zbMATH OpenOpenAlexFDO

Authors François Coste

Publication date 15 February 2017

Published in Topics in Grammatical Inference (Search for Journal in Brave)

Full work available at URL https://hal.inria.fr/hal-01244770/file/learning_language_of_biological_sequences.pdf

Mathematics Subject Classification ID

Computational learning theory (68Q32) Grammars and rewriting systems (68Q42)

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Cites work

• Bioinformatics. The machine learning approach.
• Hardness results for the center and median string problems under the weighted and unweighted edit distances
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• On Information and Sufficiency
• Polynomial identification in the limit of substitutable context-free languages
• Searching for smallest grammars on large sequences and application to DNA
• Some useful statistical properties of position-weight matrices

Cited in

(5)

• scientific article; zbMATH DE number 1700034 (Why is no real title available?)
• Use of a novel grammatical inference approach in classification of amyloidogenic hexapeptides
• Transducer inference by assembling specific languages
• scientific article; zbMATH DE number 2177290 (Why is no real title available?)
• The exploitation of assembly language instructions in biological text manipulation. II: Amino acid sequences

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