lgpr

Last update 24 September 2023

Copyright license GNU General Public License

Software version identifier 1.2.3, 1.1.3, 1.1.4, 1.1.5, 1.2.4

Description

Interpretable nonparametric modeling of longitudinal data using additive Gaussian process regression. Contains functionality for inferring covariate effects and assessing covariate relevances. Models are specified using a convenient formula syntax, and can include shared, group-specific, non-stationary, heterogeneous and temporally uncertain effects. Bayesian inference for model parameters is performed using 'Stan'. The modeling approach and methods are described in detail in Timonen et al. (2021) <doi:10.1093/bioinformatics/btab021>.

Cites work

lgpr: an interpretable non-parametric method for inferring covariate effects from longitudinal data

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