Local Smoothing Image Segmentation for Spotted Microarray Images

DOI10.1198/016214506000001158MaRDI QIDQ3632575zbMATH OpenOpenAlexFDO

Authors Peihua Qiu, Jingran Sun

Publication date 12 June 2009

Published in Journal of the American Statistical Association (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1198/016214506000001158

zbMATH Keywords

backgroundboundary curveconsistencyedge detectionforegroundgene expression datagray levelimage processingimage segmentationjump location curvelocal polynomial kernel smoothingnonparametric regressionspots

Mathematics Subject Classification ID

Image analysis in multivariate analysis (62H35) Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20) Image processing (compression, reconstruction, etc.) in information and communication theory (94A08)

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Cited in

(12)

• Sharpening spots: correcting for bleedover in cDNA array images
• Improvements on contours based segmentation for DNA microarray image processing
• The effects of error magnitude and bandwidth selection for deconvolution with unknown error distribution
• Probabilistic segmentation and intensity estimation for microarray images
• scientific article; zbMATH DE number 1966539 (Why is no real title available?)
• Segmentation of Microarray Images by Mathematical Morphology
• Agglomerative connectivity constrained clustering for image segmentation
• Water resource surveillance for the Salton Sea in California by adaptive sequential monitoring of its landsat images
• Microarray image segmentation using clustering methods
• Estimation of 2D jump location curve and 3D jump location surface in nonparametric regression
• Segmenting microarray images using a contour-based method
• A robust ratio estimator of gene expression via inverse-variance weighting for cDNA microarray images

Describes a project that uses

Uses Software

• Scanalyze

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