Local exact pattern matching for non-fixed RNA structures

DOI10.1007/978-3-642-31265-6_25MaRDI QIDQ2904505zbMATH OpenOpenAlexFDO

Authors Mika Amit, Rolf Backofen, Steffen Heyne, Gad M. Landau, Mathias Möhl, Christina Schmiedl, Sebastian Will

Publication date 14 August 2012

Published in Combinatorial Pattern Matching (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-642-31265-6_25

Mathematics Subject Classification ID

Algorithms on strings (68W32) Protein sequences, DNA sequences (92D20)

Recommendations

• String Processing and Information Retrieval
• Fast detection of common sequence structure patterns in RNAs
• Exact matching of RNA secondary structure patterns
• Efficient pattern matching for RNA secondary structures
• Local Alignment of RNA Sequences with Arbitrary Scoring Schemes

Cited in

(5)

• Exact matching of RNA secondary structure patterns
• Fast detection of common sequence structure patterns in RNAs
• Local Alignment of RNA Sequences with Arbitrary Scoring Schemes
• String Processing and Information Retrieval
• DARN! A weighted constraint solver for RNA motif localization

This page was built for publication: Local exact pattern matching for non-fixed RNA structures

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2904505)