mbmixture

Last update 19 July 2026

Copyright license MIT license, File License

Software version identifier 0.2-5, 0.4, PACKAGES.rds, 0.6, 0.8

Description

Evaluate whether a microbiome sample is a mixture of two samples, by fitting a model for the number of read counts as a function of single nucleotide polymorphism (SNP) allele and the genotypes of two potential source samples. Lobo et al. (2021) <doi:10.1093/g3journal/jkab308>.

Cites work

Identification of sample mix-ups and mixtures in microbiome data in Diversity Outbred mice

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