MetFrag Local CSV: CompTox (7 March 2019 release) Smoking MetaData File

DOI10.5281/zenodo.3364464Zenodo3364464MaRDI QIDQ6705524FDOQ6705524

Dataset published at Zenodo repository.

Emma Schymanski

Publication date: 9 August 2019

Copyright license: Creative Commons Attribution 4.0 International

Description

This is the CSV file that can be used as a local database in MetFrag (https://msbi.ipb-halle.de/MetFrag/), for those who wish to integrate this into the command line version. Note that this file is TOO LARGE to be uploaded via the web interface, this is already integrated in the web interface. This file is based off the SelectMetaData CompTox MetFrag file from the 7 March 2019 release, available from: ftp://newftp.epa.gov/COMPTOX/Sustainable_Chemistry_Data/Chemistry_Dashboard/MetFrag_metadata_files The Smoking MetaData file contains the following fields, in addition to the regular (basic) CompTox data fields: - PubMedNeuro: the LITMINEDNEURO list with total PubMed reference counts in the column - CIGARETTES, INDOORCT16, SRM2585DUST, SLTCHEMDB, THSMOKE as suspect lists. First release (July 2019, not archived) contained a smaller subset of the SRM2585DUST list.

This page was built for dataset: MetFrag Local CSV: CompTox (7 March 2019 release) Smoking MetaData File