MetabolSSMF

Authors Wenxuan Liu, Thomas Brendan Murphy, Lorraine Brennan

Last update 5 March 2025

Copyright license MIT license, File License

Description

Provides a framework to perform soft clustering using simplex-structured matrix factorisation (SSMF). The package contains a set of functions for determining the optimal number of prototypes, the optimal algorithmic parameters, the estimation confidence intervals and the diversity of clusters. Abdolali, Maryam & Gillis, Nicolas (2020) <doi:10.1137/20M1354982>.

Cites work

Simplex-Structured Matrix Factorization: Sparsity-Based Identifiability and Provably Correct Algorithms

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