microeco

Last update 24 September 2026

Copyright license GNU General Public License, version 3.0

Software version identifier 0.15.0, 0.16.0, 0.17.0, 0.19.0, 0.2.1, 0.3.0, 0.3.1, 0.3.3, 0.4.0, 0.5.1, 0.6.0, 0.6.5, 0.7.1, 0.7.5, 0.8.0, 0.9.0, 0.10.0, 0.10.1, 0.11.0, 0.12.0, 0.13.0, 0.14.0, 0.14.1, 0.19.5, 0.20.0, 1.0.0, 1.1.0, 1.2.0, 1.2.2, 1.3.0, 1.4.0, PACKAGES.rds, 1.5.0, 1.6.0, 1.7.0, 1.7.1, 1.8.0, 1.9.0, 1.9.1, 1.10.0, 1.11.0, 1.12.0, 1.13.0, 1.14.0, 1.15.0, 1.16.0, 2.0.0, 2.1.0, 2.2.0, 2.3.0, 2.4.0

Description

A series of data analysis approaches for microbiome data based on the R6 class. The classes are designed for data preprocessing, niche analysis, taxonomic abundance plot, alpha diversity analysis, beta diversity analysis, differential abundance test, null model analysis, network analysis, machine learning, environmental data analysis, functional redundancy analysis, metabolites analysis, etc.

Cited in

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