Microscopic modelling of active bacterial suspensions

DOI10.1051/MMNP/20116506MaRDI QIDQ3106460zbMATH OpenOpenAlexWikidataFDO

Authors A. Decoene, Sébastien Martin, Bertrand Maury

Publication date 21 December 2011

Published in Mathematical Modelling of Natural Phenomena (Search for Journal in Brave)

Full work available at URL https://eudml.org/doc/222291

zbMATH Keywords

chemotaxisfinite element methodfluid-particle flowspenalty methodself-propulsionStokes flow

Mathematics Subject Classification ID

Dynamics of multibody systems (70E55) Fluid-solid interactions (including aero- and hydro-elasticity, porosity, etc.) (74F10) Physiological flows (76Z05) General biology and biomathematics (92B05)

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Cited in

(19)

• Effective viscosity of bacterial suspensions: a three-dimensional PDE model with stochastic torque
• Analysis of an augmented fully-mixed finite element method for a bioconvective flows model
• Large-scale simulation of steady and time-dependent active suspensions with the force-coupling method
• Bacterial swimming and oxygen transport near contact lines
• Topics in the mathematical theory of interactions of incompressible viscous fluid with rigid bodies
• Simulation of self-propelled chemotactic bacteria in a Stokes flow
• Modelling and simulation of 2D stokesian Squirmers
• Hybrid grid-particle methods and penalization: a Sherman-Morrison-Woodbury approach to compute 3D viscous flows using FFT
• A fictitious domain method with a hybrid cell model for simulating motion of cells in fluid flow
• A computational model of the collective fluid dynamics of motile micro-organisms
• Viscous constraints on microorganism approach and interaction
• A general cell-fluid Navier-Stokes model with inclusion of chemotaxis
• Models of bacteria swimming in a nematic liquid crystal
• Phenomenological model of bacterial aerotaxis with a negative feedback
• A kinetic approach to active rods dynamics in confined domains
• Analysis of the 3D non-linear Stokes problem coupled to transport-diffusion for shear-thinning heterogeneous microscale flows, applications to digital rock physics and mucociliary clearance
• A kinetic model for semidilute bacterial suspensions
• Derivation of an Effective Rheology for Dilute Suspensions of Microswimmers
• A general formulation of bead models applied to flexible fibers and active filaments at low Reynolds number

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