Minimum tree cost quartet puzzling

DOI10.1007/S00357-010-9053-9MaRDI QIDQ263274zbMATH OpenOpenAlexFDO

Authors Tudor B. Ionescu, Géraldine Polaillon, Frédéric Boulanger

Publication date 4 April 2016

Published in Journal of Classification (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s00357-010-9053-9

zbMATH Keywords

distance methodphylogenetic tree reconstructionquartet method

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30)

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Cites work

• scientific article; zbMATH DE number 1405796 (Why is no real title available?)
• A fixed-parameter algorithm for minimum quartet inconsistency
• A polynomial time algorithm for the minimum quartet inconsistency problem with O(n) quartet errors
• Comparison of phylogenetic trees
• Consensus n-trees
• Constructing big trees from short sequences
• Inferring evolutionary trees with strong combinatorial evidence
• Performance study of phylogenetic methods: (unweighted) quartet methods and neighbor-joining
• Reconstructing the shape of a tree from observed dissimilarity data
• The complexity of reconstructing trees from qualitative characters and subtrees

Cited in

(8)

• Computing phylogenetic trees using topologically related minimum spanning trees
• Improved metaheuristics for the quartet method of hierarchical clustering
• scientific article; zbMATH DE number 1746441 (Why is no real title available?)
• A new quartet approach for reconstructing phylogenetic trees: Quartet joining method
• An exact algorithm for the minimum quartet tree cost problem
• A fast quartet tree heuristic for hierarchical clustering
• Optimal subtree prune and regraft for quartet score in sub-quadratic time
• Constructing optimal trees from quartets

Describes a project that uses

Uses Software

• Seq-Gen
• BIONJ
• PHYLIP
• fastDNAml

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