Missing pattern discovery

DOI10.1016/J.JDA.2010.08.005MaRDI QIDQ553949zbMATH OpenOpenAlexFDO

Authors Stanislav Angelov, Shunsuke Inenaga, Teemu Kivioja, Veli Mäkinen

Publication date 29 July 2011

Published in Journal of Discrete Algorithms (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jda.2010.08.005

zbMATH Keywords

suffix treespolymerase chain reaction (PCR)

Mathematics Subject Classification ID

Developmental biology, pattern formation (92C15) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Classical flows, reactions, etc. in chemistry (92E20)

Recommendations

• Pattern matching with pair correlation distance
• Motif matching using gapped patterns
• Extracting approximate patterns
• Inverse Pattern Matching
• Motif matching using gapped patterns

Cites work

• scientific article; zbMATH DE number 2086339 (Why is no real title available?)
• scientific article; zbMATH DE number 1966526 (Why is no real title available?)
• scientific article; zbMATH DE number 1786455 (Why is no real title available?)
• scientific article; zbMATH DE number 2084855 (Why is no real title available?)
• Algorithms on Strings, Trees and Sequences
• Discovery Science
• Distinguishing string selection problems.
• Efficient randomized pattern-matching algorithms
• Inverse Pattern Matching
• Searching subsequences
• Suffix trees on words

Describes a project that uses

Uses Software

• BioProspector

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